A fungo bat's size and weight make it easier to operate with one hand or two. Coaches can toss a ball up with one hand and hit pop flies or ground balls farther and with greater accuracy with a fungo bat than with a regular bat. According to an article by LJWorld, high school baseball coach Brad Stoll said fungo bats allow him to hit more balls because heavier regular bats would "wear you out." Fungo bats should be used as a practice tool only and should not be used to hit a pitched ball.

Chris Coste, a former catcher for the Philadelphia Phillies who coaches at Division III Concordia, in Moorhead, Minn., agreed. “When baseball is every single day, you’ve got to do things differently,” he said. “In the big leagues, they get so many ground balls during batting practice that infield is more for the fans and more for the scouts and things like that. At this level, we need it, and we love doing it.”
If your high school or travel team has at least two coaches, you can use what Bates calls a two-fungo drill. One coach can hit to third and second, while the other hits to short and first. If catchers are finished working with the pitchers, they can feed balls to the fungo hitters. The idea is for the third baseman to practice turning a 5-4-3, with the first baseman moving up toward second base about 60 feet instead of 90, with a net behind him to catch overthrows. The shortstop works on throwing across on 6-3s.
A fungo bat is a specially designed bat used by baseball and softball coaches for practice. The etymology of the word fungo ( /ˈfʌŋɡoʊ/) is uncertain, but the Oxford English Dictionary suggests it is derived from the Scots fung: to pitch, toss, or fling.[26] A fungo is longer and lighter than a regulation bat, with a smaller diameter. The bat is designed to hit balls tossed up in the air by the batter, not pitched balls.[27] Typical fungo bats are 35 to 37 inches (89 to 94 cm) long and weigh 17 to 22 ounces (480 to 620 g). Coaches hit many balls during fielding practice, and the weight and length allow the coach to hit balls repeatedly with high accuracy. The small diameter also allows coaches to easily hit pop-ups to catchers and infielders along with ground balls due to better control of the barrel of the bat.
The origin of the word "fungo" is unknown and argued upon as there are many possible options as to the origins of this unique word. It is assumed by many to be derived from the Scottish word fung meaning to pitch, toss, or fling. This would make sense, as fungo bats are designed to do just that. Or, the alternative to this origin is that fungo comes from 1937 where David Shulman, writer for the American Speech, said, "My guess is that the word, which is baseball slang, may be explained through the elements of a compound word, fun and go." Lastly, a third belief is that the word fungo comes from an old game, similar to that of baseball, where the players used to chant, "One go, two goes, fun goes." 
To practice throwing around the infield, Bates recommends several drills you can use. The first involves placing four fielders in a square, about 15 feet apart. The players flip the ball underhanded to each other, like in a double play. Keep their arms straight, using a stiff wrist, with gloves on their hips once the ball is out. Every fielder follows their flip, glove side first, rotating around the square. The idea is to have a sequence of catch, flip and follow. The ball should be caught with two hands, palms open. After about two minutes, repeat the process rotating the other way for another two minutes.
Even in those formative years, authorities on the game warned the practice of hitting fungoes should be limited to coaches. Henry Chadwick, one of baseball’s earliest proponents, claimed “The weakest batting is shown when the batsmen indulges in fungo hitting,” according to the Art of Batting. Others agreed that the practice was bad for training a batter’s reflexes: “While watching some of our freshmen practicing ‘fungo’ batting the other afternoon it occurred to me that it was about the worst kind of practice a batsman could imagine in training his eye in batting,” a writer claimed in the March 3, 1886 edition of The Sporting Life. “It trains the eye to meet the ball in batting it in a manner which never occurs in actual play. It ought to be prohibited on every well regulated ball field.”
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