Break your team up into 2 or 3 teams. If you do 2 teams you’ll need 8 or 9 on a team with a player for each defensive position. If you only have 8 on a team you can eliminate either the pitcher, catcher, or one outfielder based on what is a priority for your team that day.  If  you only have 12-15 players on your team break it up into 3 teams of 4-5. Then place two of the teams on defense and one team hitting fungoes. No matter what, have the teams and batting orders pre-made before practice. This will eliminate unnecessary downtime during practice.
For starters, we should clarify just what we’re talking about when we say fungo bat. Longer, lighter and thinner than a regulation bat (but a larger barrel), a fungo bat is typically 35 to 37 inches long, and weighs between 17 and 22 ounces. As David Allison wrote in the June 1978 edition of Country Journal, “A fungo bat looks to be a cross between a baseball bat and a broomstick.”
No, we're not talking about The Masters. We're talking about fungo golf, baseball's wonderful adaptation of frisbee golf. For those of you unfamiliar with the rules, the general goal is to hit predetermined objects or other landmarks located somewhere on a baseball field with a ball. Instead of a golf club, you use a fungo bat. All normal scoring rules of golf still apply.

Players can be very particular about their bats. Ted Williams cleaned his bats with alcohol every night and periodically took them to the post office to weigh them. "Bats pick up condensation and dirt lying around on the ground," he wrote, "They can gain an ounce or more in a surprisingly short time." Ichiro Suzuki also takes great care that his bats do not accumulate moisture and thus gain weight: he stores his bats in humidors, one in the club house and another, a portable one, for the road. Rod Carew fought moisture by storing his bats in a box full of sawdust in the warmest part of his house. "The sawdust acts as a buffer between the bats and the environment," he explained, "absorbing any moisture before it can seep into the wood."[25]
As I had previously mentioned, the amount of teaching points is limitless.  The length of the game will really depend on how often you stop the action in order to discuss points related to base running, backing up throws, fielding techniques, and etc.  If you have assistant coaches, have them distributed throughout the field in order to help with certain teaching points on the spot, thus eliminating full stoppages of the game.  Now get out there and start putting the “FUN” back into fungo. I know that’s pretty corny, but I couldn’t help myself 🙂
Secondly, the first base fungo hits balls to the third baseman, who turns a double play with the second baseman to the normal first baseman, while the third base fungo hits balls to the shortstop, who throws to a shortened deep firstbaseman (this means that the deep firstbaseman stands closer to the shortstop than normal, so that the throw across this infield is the correct distance - this does NOT mean that the deep man stands any closer to the normal first base position - this length should always be sufficient)
Both wooden and metal alloy (generally aluminum) bats are generally permitted in amateur baseball. Metal alloy bats are generally regarded as being capable of hitting a ball faster and farther with the same power. However, increasing numbers of "wooden bat leagues" have emerged in recent years, reflecting a trend back to wood over safety concerns and, in the case of collegiate summer baseball wood-bat leagues, to better prepare players for the professional leagues that require wood bats. Metal alloy bats can send a ball towards an unprotected pitcher's head up to 60 ft 6 in (18.44 m) away at a velocity far too high for the pitcher to get out of the way in time. Some amateur baseball organizations enforce bat manufacturing and testing standards which attempt to limit maximum ball speed for wood and non-wood bats.[17][18][19]

In 1990, Bruce Leinert came up with the idea of putting an axe handle on a baseball bat. He filed a patent application for the 'Axe Bat' in 2007 and the bat started being used in the college and pro ranks over the following years. In 2012, the Marietta College Pioneers baseball team won the NCAA Division III World Series using axe handled bats.[2] Several Major League Baseball players have adopted the bat handle including Mookie Betts, Dustin Pedroia, George Springer, Kurt Suzuki and Dansby Swanson.[3][4]
There are many advantages to using a fungo bat. If you are a coach or a parent looking to improve your player's defensive skill set, you're going to want and need a fungo bat. A normal adult wooden baseball bat will weigh around 27-31 ounces, and after a couple of rounds of pop-flys, it is going to feel like you just went through a full-on workout. With the help of a fungo bat, you will be able to hit ground balls and pop flys all day without getting fatigued.  The barrel on a fungo bat will typically be 2 1/4 inches in diameter which greatly helps increase your control over the bat through the hitting zone. While the barrel has a much more thin diameter, it is also much longer in comparison to a normal wood baseball bat. This larger hitting surface and smaller barrel combine to give coaches and parents quick swing speeds with precise accuracy. 
The bat's form has become more refined over time. In the mid-19th century, baseball batters were known to shape or whittle their own bats by hand. This allowed there to be a wide variety in shape, size, and weight. For example, there were flat bats, round bats, short bats, and fat bats. Earlier bats were known to be much heavier and larger than today's regulated ones. During the 19th century, many shapes were experimented with, as well as handle designs. Today, bats are much more uniform in design.

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For starters, we should clarify just what we’re talking about when we say fungo bat. Longer, lighter and thinner than a regulation bat (but a larger barrel), a fungo bat is typically 35 to 37 inches long, and weighs between 17 and 22 ounces. As David Allison wrote in the June 1978 edition of Country Journal, “A fungo bat looks to be a cross between a baseball bat and a broomstick.”
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