First base fungo hits fly balls to center field (helps here if both fungo hitters move up and apart, hitting from about the front of the mound extended towards the bases). Center throws to second, second baseman is cutoff (for us it was, anyways - change to suit your style). Third base fungo hits balls to left field, who throw to third, with a second shortstop as cutoff (but you really don't need one, if you're shorthanded).
The origin of the word "fungo" is unknown and argued upon as there are many possible options as to the origins of this unique word. It is assumed by many to be derived from the Scottish word fung meaning to pitch, toss, or fling. This would make sense, as fungo bats are designed to do just that. Or, the alternative to this origin is that fungo comes from 1937 where David Shulman, writer for the American Speech, said, "My guess is that the word, which is baseball slang, may be explained through the elements of a compound word, fun and go." Lastly, a third belief is that the word fungo comes from an old game, similar to that of baseball, where the players used to chant, "One go, two goes, fun goes." 
First base fungo hits fly balls to center field (helps here if both fungo hitters move up and apart, hitting from about the front of the mound extended towards the bases). Center throws to second, second baseman is cutoff (for us it was, anyways - change to suit your style). Third base fungo hits balls to left field, who throw to third, with a second shortstop as cutoff (but you really don't need one, if you're shorthanded).

First-base coach Daryl Boston has been working Palka with fungo drills. — Phil Thompson, chicagotribune.com, "Yoan Moncada has untapped power from right side, Rick Renteria says," 23 May 2018 While the Angels took infield before the Texas finale Wednesday, Ohtani stood by the cage with a bat in his hand waiting for BP near where Scioscia was hitting fungo to some infielders. — Stephen Hawkins, chicagotribune.com, "Shohei Ohtani eager for more as Angels balance work for 2-way star," 12 Apr. 2018 And dad liked to take us to Lincoln Park and hit fungos to my twin brother, Javier, and me. — John Hickey, The Mercury News, "Adam and Will Rosales proselytize for baseball," 11 Apr. 2017 Since then, his only baseball activity has been hitting one-handed fungos to teammates in ground ball practice. — Nick Groke, The Denver Post, "Colorado skipper Bud Black faces the Padres with a new perch; Rockies still scanning Desmond, Dahl and Murphy," 10 Apr. 2017

First base fungo hits fly balls to center field (helps here if both fungo hitters move up and apart, hitting from about the front of the mound extended towards the bases). Center throws to second, second baseman is cutoff (for us it was, anyways - change to suit your style). Third base fungo hits balls to left field, who throw to third, with a second shortstop as cutoff (but you really don't need one, if you're shorthanded).
Next, the third base fungo hits to left, who come home, third baseman cuts (again, 60' from home, about the pitchers mound). First base fungo hits to right, who throw again to second (this is where we practised cutting off doubles on balls hit into the right field corner - it's really practiseing hitting your cutoff man quickly than anything else - also the reason it's safe to do while left field goes home).
For starters, we should clarify just what we’re talking about when we say fungo bat. Longer, lighter and thinner than a regulation bat (but a larger barrel), a fungo bat is typically 35 to 37 inches long, and weighs between 17 and 22 ounces. As David Allison wrote in the June 1978 edition of Country Journal, “A fungo bat looks to be a cross between a baseball bat and a broomstick.”
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